Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTTVSISDEILAAAKRRARERGQSL----GAVIEDALRREFAAAHVGGARPTVPVFDGGTGPRRGIDLTSNRALSEVLDEGLELNSRK
1WZN Chain:A ((69-127))
----LDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFS--TIMYFD-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8988 for 188 contacts (-47.8/contact) +
2D Compatibility (PS) -5019 + (NN) -648 + (LL) 1276
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -19429.0 ( -103.35 by residue)
QMean score : 0.265
(partial model without unconserved sides chains):
PDB file :
Tito_1WZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WZN-query.scw
PDB file :
Tito_Scwrl_1WZN.pdb
: