Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQAQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPMAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRDAAAKLPS
3ICO Chain:A ((24-267))
--SSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQAQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPMAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRDAAAKLP-
General information:
TITO was launched using:
RESULT:
Template:
3ICO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140801 for 2126 contacts (-66.2/contact) +
2D Compatibility (PS) -27692 + (NN) -30177 + (LL) 152
1D Compatibility (HY) -29200 + (ID) 12200
Total energy: -239918.0 ( -112.85 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_3ICO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ICO-query.scw
PDB file :
Tito_Scwrl_3ICO.pdb
: