Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIADVLRNKGAAVVTINPDATVGELLAGLAEQNIGAMVVVGAEGVV-GIVSERDVVRQLHTYGASVLSRPVAKIMSTTVATCTKSDTVDKISVLMTENRVRHVPVLDGKKLIGIVSIGDVVKSRMGELEAEQQQLQSYITQG
3FHM Chain:A ((26-151))
--VKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGE---------------
General information:
TITO was launched using:
RESULT:
Template:
3FHM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94880 for 863 contacts (-109.9/contact) +
2D Compatibility (PS) -13706 + (NN) -7119 + (LL) 1760
1D Compatibility (HY) -10800 + (ID) 2850
Total energy: -127595.0 ( -147.85 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_3FHM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FHM-query.scw
PDB file :
Tito_Scwrl_3FHM.pdb
: