Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVEEKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFYALDRLWGDCPVVPVDLSANSAGAQ
4WCW Chain:A ((2-117))
-TANREAIDMARVAAGAAAAKLADDVVVIDVSGQLVITDCFVIASGSNERQVNAIVDEVEEKMRQAGYRPARREGAREGRWTLLDYRDIVVHIQHQDDRNFAALDRLWGDCPVVPVD---------
General information:
TITO was launched using:
RESULT:
Template:
4WCW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81950 for 911 contacts (-90.0/contact) +
2D Compatibility (PS) -13052 + (NN) -10093 + (LL) 628
1D Compatibility (HY) -14800 + (ID) 5750
Total energy: -125017.0 ( -137.23 by residue)
QMean score : 0.692
(partial model without unconserved sides chains):
PDB file :
Tito_4WCW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WCW-query.scw
PDB file :
Tito_Scwrl_4WCW.pdb
: