Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELSYAPDVAGRRSNWPKGSGVNTWTAIRWTFAEDSPYVGTG-------LERMAS---DTHGGGGGRPVTPPPPGMHHLGCSRGVLLISSQRDA-GHKTCDPAAGGTLTSVLT
1OWS Chain:B ((19-90))
------------------------------WDFADYGCYCGSGSGSPTDDLDRCCQTHDNCYGAGGGSTGCAPKSRTYTYQCSQGTLTCSGENSACAATTCD------------
General information:
TITO was launched using:
RESULT:
Template:
1OWS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6136 for 313 contacts (19.6/contact) +
2D Compatibility (PS) -6560 + (NN) -8177 + (LL) 1944
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -10557.0 ( -33.73 by residue)
QMean score : -0.142
(partial model without unconserved sides chains):
PDB file :
Tito_1OWS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OWS-query.scw
PDB file :
Tito_Scwrl_1OWS.pdb
: