Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESLKPDESKRLSIEESDCVSAGFQCPEIHWQDFPTPNFDCSYSTSSQGR
1KG1 Chain:A ((48-56))
--------------------GNGFQCPTGYRQC-----------------
General information:
TITO was launched using:
RESULT:
Template:
1KG1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 0 for 16 contacts (0.0/contact) +
2D Compatibility (PS) -859 + (NN) 642 + (LL) 1492
1D Compatibility (HY) -400 + (ID) 250
Total energy: 625.0 ( 39.06 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_1KG1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KG1-query.scw
PDB file :
Tito_Scwrl_1KG1.pdb
: