Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSTLQGLAEYREEIRKSRFHTIAAPVADEDEAQAFIAAHRDASAGHNCWAWKCGAQYRFSDDGEPGGSAGRPILAAIEGQDMDCVAVLVSRWFGGIKLGTGGLARAYGGGAAKCLQQAPRSELVERCRVRFACAFAD----HALLKARSLALGASVAAEDYGADGVVLTLELPVARFEALQALLVDLSRGQVRPQRLDA
2CVE Chain:A ((2-188))
-SLTLADKVVYEEEIQKSRFIAKAAPVASEEEALAFLAENREPEATHNGHAYKIGLLYRFSDDGEPSGTAGRPILHAIEAQGLDRVAVLVVRYFGGVKLGAGGLVRAYGGVAAEALRRAPKVPLVERVGLAFLVPFAEVGRVYALLEARALK-----AEETYTPEGVRFALLLPKPEREGFLRALLDATRGQVALE----
General information:
TITO was launched using:
RESULT:
Template:
2CVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103214 for 1409 contacts (-73.3/contact) +
2D Compatibility (PS) -20044 + (NN) -11766 + (LL) 700
1D Compatibility (HY) -13600 + (ID) 5100
Total energy: -153024.0 ( -108.60 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_2CVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CVE-query.scw
PDB file :
Tito_Scwrl_2CVE.pdb
: