Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKSLHQYAHVFSRLSLFGLAFAAAAQAQSQSLTVISFGGATKAAQEQAYFKPFERSGGGQVVAGEYNGEMAKVKAMVDVGKVSWDVVEVESPELLRGCDEGLFERLDPARFGDPAQFVPGTFSECGVATYVWSMVMAYDSTKLARAPQSWADFWNVREFPGKRGLRK-GAKYTLEVALLADGVKAEDLYKVLATPEGVSRAFAKLDQLKPNIQWWEAGAQPPQWLAAGDVVMSAAYNGRIAAAQKEGVKLAIVWPGSLYDPEYWAVVKGTPNKALAEKFIAFASQPQTQKVFSEQIPYGPVHKGTLALLPKTVQEALPTAPANLEGARAVDAEFWVDHGEELEQRFNAWAAR |
4EUO Chain:A ((2-314)) | -------------------------------DLVFSSWGGTTQDAQKAAWAEKFMVETGINVLQ-DGPTDYGKLKAMVEANGVTWDVVDVEGDYAAQAGPKGLLEKLDFSVI-DKTKLDPRFVTDYSVGSFYYSFVIGCNVDSVSACPKSWADLFDTAKFPGKRTFYKWSAPGVIEAALLADGVTADKLY-----PLDLDRAFKKLDTIKSDIIWWSGGAQSQQLIASAEAPFGSVWNGRMTALEQSGVKVETSWAQNITAADSLVVPKGTKNKDAAMKFIALATSAQAQADMATATGYAPVNIESAKLMDPKIAKSLP--DQQTESQVNADMNYWAQHRDEIGERWYAWQAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EUO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93088 for 2801 contacts (-33.2/contact) +
2D Compatibility (PS) -34180 + (NN) -15875 + (LL) 3660
1D Compatibility (HY) -20400 + (ID) 5450
Total energy: -165333.0 ( -59.03 by residue)
QMean score : 0.455
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