Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAPLRIALIGAGNMGRQHYHRLQRIAG-ARLCAVADPQGQAFAA---DTGVPWFGDHRRLLEEARPQAAIVANPNNLHVATALDCLAAGVPLLLEKPVGVQLDEVSELVAVARRSGVPLLVGHHRRHNPLVVRARQLIAEGALGR--LLSVTALWQLKKPDSYFEVA-WRR--EPGAGMLLTNLIHDLDLLRHLCGEVREVQALAGNAIRGLPNEDNIALLLRFANGALGSLTGCDAAAAPWSWELAAGENPVYPRQAEQPCYLLAGTE----GALSLPQLRRWRYAEAR---QGWHDPLAASEEAVATGDPLQRQLEHFVRVARGEEAPLMDATDAARTLALVEAVREAARSGRACAPASF |
| 3Q2I Chain:A ((11-346)) | -DRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVNVFWT--RPQEYYDAAGWRGTWEFDGGAFMNQASHYVDLLDWLIGPVESVQAYTATLARNIEVEDTGTVSVKWRSGALGSMNVT---------------MLTYPKNLEGSITILGEKGSVRVGGVAVNEIQHWEFSEPHAMDEEIKDAS-------GFGHPL--YYDNVIKTMRGEATPETDGREGLKSLELLIAMYLSARDGRRVSLPLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193321 for 2628 contacts (-73.6/contact) +
2D Compatibility (PS) -33907 + (NN) -14431 + (LL) 2616
1D Compatibility (HY) -18000 + (ID) 4400
Total energy: -261443.0 ( -99.48 by residue)
QMean score : 0.408
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