Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRTVLVLNGPNLNLLGTREPQTYGRRTLGEIADECAAFAETRGFAVDFRQTNQEGQLLDWIHQARGR-VAGIVINPAAWTHTSVALRDALAAVELPVVEVHLSNVHQREAFRHHSYVSPVALGVICGFGSLGYRLALEHFAERFEAAA
4L8L Chain:A ((3-145))
---TLLVLHGPNLNLLGT-------STTLGQINQDLERRAREAGHHLLHLQSNAEYELIDRIHAARDEGVDFIIINPAAFTHTSVALRDALLAVSIPFIEVHLSNVHKREPFRHHSYFSDVAVGVICGLGATGYRLALESALEQLQ---
General information:
TITO was launched using:
RESULT:
Template:
4L8L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126394 for 1069 contacts (-118.2/contact) +
2D Compatibility (PS) -14906 + (NN) -4246 + (LL) 948
1D Compatibility (HY) -14400 + (ID) 4100
Total energy: -163098.0 ( -152.57 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_4L8L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L8L-query.scw
PDB file :
Tito_Scwrl_4L8L.pdb
: