Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSRLLSGIGAGPDSGSYTDLNRLNQLKVGKDRDGEANIRKVAQEFESLFLNEMLKSMRSANEALGDGNFMNSQTTKQYQDMYDQQLSVSLSKNAGGIGLADVLVRQLSKMKQGSRGNGENPFARVAENGAGRWPSNPSAQAGKALPMPEAGRDDSKLLNQRRLALPGKLAERMLAGIVPSASPAASQMQSLGQDSYLPAQSYPAASRRGFSTDGVDSQGSRRIAQPPLARGKSMFASADEFIATMLPMAQKAAERIGVDARYLVAQAALETGWGKSIIRQQDGGSSHNLFGIKTGSRWDGASARALTTEYEGGKAVKEIAAFRSYSSFEQSFHDYVSFLQGNDRYQNALDSAANPERFMQELQRAGYATDPQYARKVAQIARQMQTYQAVAAAGTPPLG
3VWO Chain:A ((1-142))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQAFVDATWPQAAKAAQSLGVPAHFLVAQAALETGWGKSQIRNKDGTPSYNLFNIKAGSNWTGKVVEARTVEYENGQRKVRVERFRAYDSYEQAFQDYADLVGNSPRYAK-VAGKTDGHAFARALQEGGYATDPSYADKLARVINGNALRQRLMHH------


General information:
TITO was launched using:
RESULT:

Template: 3VWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52985 for 1050 contacts (-50.5/contact) +
2D Compatibility (PS) -15705 + (NN) -8211 + (LL) 11644
1D Compatibility (HY) -10000 + (ID) 3400
Total energy: -78657.0 ( -74.91 by residue)
QMean score : 0.624

(partial model without unconserved sides chains):
PDB file : Tito_3VWO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VWO-query.scw
PDB file : Tito_Scwrl_3VWO.pdb: