Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQAIRSILVVIEPDQLEGLALKRAQLIAGVTQSHLHLLVCEKRRDHSAALNDLAQELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFAPCPVLMTKTARPWTGGKILAAVDVGNNDGEHRSLHAGIISHAYDIAGLAKATLHVISAHPSPMLSSADPTFQLSETIEARYREACRTFQAEYGFSDEQLHIEEGPADVLIPRTAQKLDAVVTVIGTVARTGLSGALIGNTAEVVLDTLESDVLVLKPDDIIAHLEELASKE
3MT0 Chain:A ((5-290))
-QAIRSILVVIEPDQLEGLALKRAQLIAGVTQSHLHLLVCEKRRDHSAALNDLAQELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFAPCPVLMTKTARPWTGGKILAAVDVGNNDGEHRSLHAGIISHAYDIAGLAKATLHVISAHP---------TFQLSETIEARYREACRTFQAEYGFSDEQLHIEEGPADVLIPRTAQKLDAVVTVIGTVARTGLSGALIGNTAEVVLDTLESDVLVLKPDDIIAHLEELASKE
General information:
TITO was launched using:
RESULT:
Template:
3MT0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -199405 for 2243 contacts (-88.9/contact) +
2D Compatibility (PS) -30892 + (NN) -12651 + (LL) 296
1D Compatibility (HY) -36000 + (ID) 13850
Total energy: -292502.0 ( -130.41 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3MT0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MT0-query.scw
PDB file :
Tito_Scwrl_3MT0.pdb
: