Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHNESRPEAPLRVLVVGAGFAGLGLAIRLRQAGIDDYLVLEKAADVGGCWRENRYPGAACDVPSHLYSFSFEPKA----DWSRKFAPQAEILDYLRHCADKYRLREKIRFHCEVEEARFDAGSGEWQVRCADGQTLRARALVCATGQLSRPLLPRLPGLERFQGPAFHSANWDAE-VELAGKRVAVIGTGASAIQFVPRIAPQVQRLSLFQRSA------------PYVIAKPDRTYADWERRLKARWPWLQRLDRGLKYLHHESRMLAFATF--------PALMKVMR------------LSFHRH-LHRQIADPQLRARLVPD-YPLGCKRILISNDYYPALARSNVELVDT---GIREVTEDAVVGRDGRRHEVDAIIFGTGF-AATEFLAPMRILGLDGRDLRQAWADGAEAYKGISVSGFPNLFILYGPNTNLGHNSIVYMLESQFPYVLGCLRQLQEQGLRYLDVKPEVQRRFNLEVQQGLRHTVWERGCDSWYKTAAGKNTNNWPGYTFVYRWRTRRPELADYDLAR |
1W4X Chain:A ((12-505)) | -----QPPEEVDVLVVGAGFSGLYALYRLRELGRSVH-VIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEF-REESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSE-REYELDSLVLATGFDALTGALFKIDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMFKNGLTRSEAVLEKEDEWVEHVNEIADETLYPMTA-SWYTGANVPGKPRVFMLYVGGFHRYRQICDEVAAKGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W4X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -306810 for 3636 contacts (-84.4/contact) +
2D Compatibility (PS) -46997 + (NN) -10284 + (LL) 280
1D Compatibility (HY) -32400 + (ID) 8650
Total energy: -404861.0 ( -111.35 by residue)
QMean score : 0.468
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