Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPHLIYYVATSLDGFIARPDGSVDWL-DRFAEGGNDHGYNGFYQGIDGLLMGRGTYDIVRGFGDWPYPGKPCQVLTRNPRESAVEGVELRH---DTPQEGLARLGEQGCRRVWLAGGGSLAGSCLAAGLLDEVIVSVIPQLLGAG---IPLFAGGRERRLQLLEQHGYNSGIVQMRYQVIAEDDPQ
2XW7 Chain:A ((7-172))
-----VYYTASSLDGYIVDENQSLDWLTSRDITPDGPFGYEQFIETIGVLVMGASTYEWVVEHGDWSY-DQPAWVLTHRP-EIAAESHPMQVFSGDVAELHPELVAAAGGKDVWVVGGGDVAAQFVAADLIDEIIVSYAPCTLGVGSRVLPM------RSEWVLDDCARNGDFVCARWK--------
General information:
TITO was launched using:
RESULT:
Template:
2XW7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79917 for 1150 contacts (-69.5/contact) +
2D Compatibility (PS) -17273 + (NN) -7047 + (LL) 920
1D Compatibility (HY) -12800 + (ID) 3050
Total energy: -119167.0 ( -103.62 by residue)
QMean score : 0.276
(partial model without unconserved sides chains):
PDB file :
Tito_2XW7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XW7-query.scw
PDB file :
Tito_Scwrl_2XW7.pdb
: