Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGPERITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQLVMATETDVALPAKPQAMQAFLTEYCGAAAGQIRVFGQNDWMAPPASGSSAPNAMVICPCSTGTLSAVATGACNNLIERAADVALKERRPLVLVPREAPFSSIHLENMLKLSNLGAVILPAAPGFYHQPQSVEDLVDFVVARILNTLGIPQDMLPRWGEQHLVSDE
3ZQU Chain:A ((1-207))
MSGPERITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQLVMATETDVALPAKPQAMQAFLTEYCGAAAGQIRVFGQNDWMAPPASGSSAPNAMVICPCSTGTLSAVATGACNNLIERAADVALKERRPLVLVPREAPFSSIHLENMLKLSNLGAVILPAAPGFYHQPQSVEDLVDFVVARILNTLGIPQDMLPRWGEQHLVS--
General information:
TITO was launched using:
RESULT:
Template:
3ZQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -179188 for 1695 contacts (-105.7/contact) +
2D Compatibility (PS) -22467 + (NN) -17583 + (LL) 28
1D Compatibility (HY) -29200 + (ID) 10350
Total energy: -258760.0 ( -152.66 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_3ZQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZQU-query.scw
PDB file :
Tito_Scwrl_3ZQU.pdb
: