Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASVQSGKMIVGLDIGTSKVVALVGEVTADGQLEVVGIGTHPSRGLKKGVVVNIESTVQSIQRAIDEAQQMAGCRIHSAFVG--IAGNHIRSLNSHGIVAIRDREVNPADIERVLDAAQAVAIPADQRVLHTLAQDYVIDNQEGVREPLGMSGVRLEAKVHVVTCAVNASQ--NIEKCVRRCGLEVDDIILEQLASAY---SVLTEDEKELGVCLVDIGGGTTDIAIFTEGAIRHTAVIPIAGDQVTNDIAMALRTPTQYAEEIKIRYACALAKLAGAGETIKVPSVGDRPPRELSRQALAEVVEPRYDELFTLVQAELRRSGYEDLIPAGIVLTGGTSKMEGAVELAEEIFHMPVRLGVPYSVKGLTDVVRNPIYSTGVGLLMYGLQKQSDGMSMSVSGSSYSSDEPKAPVLERLKRWVQGNF |
| 3WT0 Chain:A ((25-367)) | ----------VSIDIGSSSVKTIVGEKFHNG-INVIGTGQTYTSGIKNGLIDDFDIARQAIKDTIKKASIASGVDIKEVFLKLPIIGTEVYD-ESNEIDFYEDTEINGSHIEKVLEGIREKNDVQETEVINVFPIRFIVDKENEVSDPKELIA-RHSLKVEAGVIAIQKSILINMIKCVEACGVDVLDV----YSDAYNYGSILTATEKELGACVIDIGEDVTQVAFYERGELVDADSIEMAGRDITDDIAQGLNTSYETAEKVKHQYGHAFYDSASDQDIFTVEQVDSDETVQYTQKDLSDFIEARVEEIFFEVFDVLQDLGLTK-VNGGFIVTGGSANLLGVKELLSDMVSEKVRIHTP--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WT0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218858 for 2699 contacts (-81.1/contact) +
2D Compatibility (PS) -36706 + (NN) -9174 + (LL) 5144
1D Compatibility (HY) -26000 + (ID) 5150
Total energy: -290744.0 ( -107.72 by residue)
QMean score : 0.540
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