Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLDAYDHRILAALQRDGRLSNVQLAEEIGLSPSPCLRRVRLLEEAGVIRGYQASIDRDEVGLGLTVFVGIKVERHRQEQAEAFHRAVVDLPEVISVHLVSGESDFLLQVVVPDLRAYERLLSETLLRLPGVSDIRSNFAIKTVKAPAPLPLGHLAG
2GQQ Chain:A ((12-154))
--LDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVK------------
General information:
TITO was launched using:
RESULT:
Template:
2GQQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94985 for 888 contacts (-107.0/contact) +
2D Compatibility (PS) -15603 + (NN) -8060 + (LL) 512
1D Compatibility (HY) -16000 + (ID) 3550
Total energy: -137686.0 ( -155.05 by residue)
QMean score : 0.680
(partial model without unconserved sides chains):
PDB file :
Tito_2GQQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GQQ-query.scw
PDB file :
Tito_Scwrl_2GQQ.pdb
: