Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVSVSLVLGVGLGCSSPALWAETESPAELEVLTVTAEAERAEGPVQGYRANRTASATRTDTRIEDIPQAISVVPRQVLDDLDSARIERALDFAGGVSRQNNFGGLTMFEYNVRGF-TTSEFYRDGFSANRGYM-NAPDSATIERVEILKGPASSLYGRGDPGGTVNLVTKKPQAERFARLHASAGSWDRYRSTLDLNTPLDEEGDLLYRMNLAVEDSKGFRDYADGQRLLVAPSISWQLDPDTSLLVEAEVVRNR----QVF--DRGTVAPHNHLGSLPRSRFFGEPDDGKIDNNNE--TLQATLRHHFNEQWSLRLASHYKHGHLDGYASENSSLAADGYSLRR-EYRYRDFEWHDSITQLDLLGDLHT-----------GSIRHQLLMGLEYERYHNDELILRSIPSRNPYAIDIRRPVYG-----QPKPPFGRDDRNHEEVDAMALNLQDQIEFSEKWRGLLGVRFDRYRQDMNATRLNNGRFRETSSQQTQRAATPRIGVLYQATPEVGLFANASKSFKPNGGTDMAGKAFDPEEGRGYEAGVKLDLLDGRLGMTLAAFHLKKKNVLTADPSNPGYQQTAGEARSQGFDLQFSGQLTEQLRLIGAYAYIDAEVTKDEN-IARGSRLLNVPKHSGSLMGVYEFREGWLHGADAGAAVNYVGERAGDSSDSGFELPAYTTVDLLARY------PLASNATLGVNVNNLFDRRYYERSYNNVWVAPGEPRNLTMSLTLNY |
| 3QLB Chain:A ((73-725)) | --------------------------------------PDSATGPQAGYVAKRSLSGTKTDASLSEIPQSISVITRDQMDAQQVQSVNEALRYTAGVQANTTAASQRFDTLSIRGFDVTTGMLRDGLKGNTAQAWPKVEAYGLERIDVLKGPASVLFGQNSPGGVVNQISKRPLDKPFHEVQIQGGSFDRAQGQFDFSGPLDDEGQFLYRLVGLERDSGTQFDHIKDDKQYFAPSFTWKPNDDTSLTLLADYTQDTFGAPRVFLPAQGTLL-GNPNGKVRHNVFLDEP---GLDNDRTQYSLGYLLEHRLNDVWSLNSSARYGHVNLLTNTASGMSLAPDLRTLNRAAYRFR------------IVGDTYSLDNNAQARWNLGSTQMVSLLGIDYRRTREDYYLRGGSAS----PIDIYNPVHHHHGVFDPSTPFTNTVQRADQVGVYA---QQQFTFDEHWVLTVGG-----RQDRSSARTDN-RMNDSGSKQDDEKFTYRTGLVYLADNGLAPYISYSTSFDPVLGTNFYGTPYKPTSAKQSEVGVKYQPPGIDSYITLSLFDLTQENVLTTDPAQRLNKIQTGEINVRGIELEGKASLARGLDLLAALTYNDAEVSKSNNPLEKGKRPTDTPEKMASLWADYTLPEGPLSGLGFGAGVRYIGSTEADAANTQ-RVPSYTLLDAAVHYDFDKLIPAAKGLRLAVNATNLTDKHYYE------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QLB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 158714 for 5063 contacts (31.3/contact) +
2D Compatibility (PS) -62150 + (NN) 5285 + (LL) 5048
1D Compatibility (HY) -28400 + (ID) 10600
Total energy: 67897.0 ( 13.41 by residue)
QMean score : 0.117
|
|
|