Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNPSTAARALGIDFGTSNSTVGWWRPEVEPLIELEDGKITLPSVVFFNVEERR--PVYGRQALGEYLEGYEGRLMRSLKSLLGSKLLKSETTVLGSALPFKDLLGLFIGQLKARGEAAAGQAFDAVVLGRPVFFVDDDPEADREAQDTLVQVANKLGFKEVSFQYEPIAAAFDYERCIQREELVLIVDIGGGTSDFSLVRLAPERRNLAERQDDILATGG-VHIGGTDFDKQLSLEGVMPLFGYGSRMKSDAFMPTSYHLNLATWHTINAVYAQKSQLALKNMRYDIVDSTGIDRLFRLIEERAGHWLAMQVEDSKIRLTETERLHLSLERIEAGLGVELTRGLFENAVDGLLERVRNSVAQLLASAGVDPDRVDTVFFTGGSSGIPALRRSVSAMLPNARHVEGNLFGSIGSGLAIEAKKRYG |
2V7Y Chain:A ((2-347)) | ------SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAI------TNPNTIISIKRHMGTDY---KVEIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFND----AQRQATKDAGRIA---GLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILE-------LGDGVFEVKATAGDNHLGGDDFDQVI----------------------IDYLVN--QFKQEHGIDLSKDKMALQRLK---------DAAEKAKKELSG-VTQTQISLPFISANENGPLHLEM---------TLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQ------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2V7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -167961 for 2914 contacts (-57.6/contact) +
2D Compatibility (PS) -35459 + (NN) 899 + (LL) 3584
1D Compatibility (HY) -13200 + (ID) 5250
Total energy: -217387.0 ( -74.60 by residue)
QMean score : 0.402
|
|
|