Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPPITITRLDLQRLERLLDGLDEFG-PAAEALEAELSRAQVVGHDEIPPGVVTMNSTVRCREESSGKEYTLTLVYPEDVAGEG-KVSILAPVGTALLGLTIGQTIDWPAPSGKTLKLTLLEIEYQPEAAGDYAR
2PN0 Chain:A ((5-127))
---PKIMISSLDAERLEILLETLSQNAFPGRDDLEAELARAEVVDPEEIPPTVVTMNSTVRFRVESSAEEF-LTLVYPKDVDTSGEKISILAPVGSALLGLAQGDEIEWPKPGGGVLRVRIVEVTY----------
General information:
TITO was launched using:
RESULT:
Template:
2PN0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11516 for 752 contacts (-15.3/contact) +
2D Compatibility (PS) -12950 + (NN) -9386 + (LL) 696
1D Compatibility (HY) 4000 + (ID) 650
Total energy: -29806.0 ( -39.64 by residue)
QMean score : 0.208
(partial model without unconserved sides chains):
PDB file :
Tito_2PN0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PN0-query.scw
PDB file :
Tito_Scwrl_2PN0.pdb
: