Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQMPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
1BMB Chain:A ((11-108))
-------------------------------------------------------KPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQ----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1BMB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60441 for 672 contacts (-89.9/contact) +
2D Compatibility (PS) -10606 + (NN) -7270 + (LL) 6016
1D Compatibility (HY) -13200 + (ID) 4900
Total energy: -90401.0 ( -134.53 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_1BMB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BMB-query.scw
PDB file :
Tito_Scwrl_1BMB.pdb
: