Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKVE
4AZM Chain:A ((4-137))
MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTLKTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVECVMNNVTCTRIYEKV-
General information:
TITO was launched using:
RESULT:
Template:
4AZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18658 for 699 contacts (-26.7/contact) +
2D Compatibility (PS) -14896 + (NN) -2960 + (LL) 104
1D Compatibility (HY) -18000 + (ID) 6700
Total energy: -61110.0 ( -87.42 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_4AZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AZM-query.scw
PDB file :
Tito_Scwrl_4AZM.pdb
: