Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFQYFQRMTTVSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEPPKGAHFLAKSLDDALELIEDPELTNKVDVVWIVGGSSVYKEAMNKPGHVRLFVTRIMQEFESDAFFPEIDFEKYKLLPEYPGVPLDVQEEKGIKYKFEVYEKNN
2FZJ Chain:A ((1-186))
-VRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEPPRGAHFLAKSLDDALRLIEQPELASKVDMVWIVGGSSVYQEAMNQPGHLRLFVTRIMQEFESDTFFPEIDLGKYKLLPEYPGVLSEVQEEKGIKYKFEVYEKKD
General information:
TITO was launched using:
RESULT:
Template:
2FZJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122822 for 1395 contacts (-88.0/contact) +
2D Compatibility (PS) -20208 + (NN) -11104 + (LL) 208
1D Compatibility (HY) -26000 + (ID) 8350
Total energy: -188276.0 ( -134.96 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_2FZJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FZJ-query.scw
PDB file :
Tito_Scwrl_2FZJ.pdb
: