Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEPPRGAHFLAKSLDDALRLIEQPELASKVDMVWIVGGSSVYQEAMNQPGHLRLFVTRIMQEFESDTFFPEIDLGKYKLLPEYPGVLSEVQEEKGIKYKFEVYEKKD
2FZJ Chain:A ((1-186))
-VRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFKYFQRMTTTSSVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKEPPRGAHFLAKSLDDALRLIEQPELASKVDMVWIVGGSSVYQEAMNQPGHLRLFVTRIMQEFESDTFFPEIDLGKYKLLPEYPGVLSEVQEEKGIKYKFEVYEKKD
General information:
TITO was launched using:
RESULT:
Template:
2FZJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124127 for 1395 contacts (-89.0/contact) +
2D Compatibility (PS) -20064 + (NN) -8972 + (LL) 208
1D Compatibility (HY) -27200 + (ID) 9300
Total energy: -189455.0 ( -135.81 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_2FZJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FZJ-query.scw
PDB file :
Tito_Scwrl_2FZJ.pdb
: