Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGEAPQEPQS
3LW1 Chain:A ((6-236))
MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGD-KKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT-----------------
General information:
TITO was launched using:
RESULT:
Template:
3LW1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78446 for 1740 contacts (-45.1/contact) +
2D Compatibility (PS) -24912 + (NN) -11961 + (LL) 32
1D Compatibility (HY) -29200 + (ID) 11500
Total energy: -155987.0 ( -89.65 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_3LW1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LW1-query.scw
PDB file :
Tito_Scwrl_3LW1.pdb
: