Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERPQLDSMSQDLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFEELQALLTEEHKDQSPSQTEFLRQRPASLVQDTTSAETPRGKSQISTSSSQTPLLRWVLTLSFLLATVAVGIYAM
1DVE Chain:A ((10-223))
---------SQDLSEALKEATKEVHIRAENSEFMRNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFEELQALLTE------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100453 for 1687 contacts (-59.5/contact) +
2D Compatibility (PS) -23589 + (NN) -19062 + (LL) 5380
1D Compatibility (HY) -28000 + (ID) 10700
Total energy: -176424.0 ( -104.58 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_1DVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DVE-query.scw
PDB file :
Tito_Scwrl_1DVE.pdb
: