Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLGKQASAEEDSFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
1UAJ Chain:A ((1-246))
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG-------------LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNS
General information:
TITO was launched using:
RESULT:
Template:
1UAJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148277 for 1686 contacts (-87.9/contact) +
2D Compatibility (PS) -25205 + (NN) -10439 + (LL) 576
1D Compatibility (HY) -33200 + (ID) 11650
Total energy: -228195.0 ( -135.35 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_1UAJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UAJ-query.scw
PDB file :
Tito_Scwrl_1UAJ.pdb
: