Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSNSTYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWLGYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRDAVECGGQWESQCHPPATSPLVAAQPSDT |
| 2Y00 Chain:A ((17-300)) | ------------------------LMALVVLLIVAGNVLVIAAIGSTQRLQTL-TNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAI-TSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDE-----DPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKE---Q------------SRVMLMREH---------KALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -263919 for 2042 contacts (-129.2/contact) +
2D Compatibility (PS) -27198 + (NN) -797 + (LL) 6900
1D Compatibility (HY) -34400 + (ID) 6050
Total energy: -325464.0 ( -159.38 by residue)
QMean score : 0.328
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