Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMDVNSSGRPDLYGHLRSFLLPEVGRGLPDLSPDGGADPVAGSWAPHLLSEVTASPAPTWDAPPDNASGCGEQINYGRVEKVVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAVMPFVSVTDLIGGKWIFGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASITLPPLFGWAQNVNDDKV--CLISQD-FGYTIYSTAVAFYIPMSVMLFMYYQIYKAARK----------------------------------------SAAKHKFPGFPRVEPDS-------------VIALNGIVKLQKE--VEECANLSRLLKHERKNISIFK----REQKAATTLGIIVGAFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYRNINRKLSAAGMHEALKLAERPERPEFVLRACTRRVLLRPEKRPPVSVWVLQSPDHHNWLADKMLTTVEKKVMIHD |
| 4IAR Chain:A ((20-396)) | --------------------------------------------------------------------------------KVLLVMLLALITLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMP-ISTMYTVTGRWTLGQVVCDFWLSSDITCCTASIWHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFF-WRQA------SECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRIADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTR-NAYIQKYLAARERKATKTLGIILGAFIVCWLPFFIISLVMP-I------WFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFK----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243797 for 2192 contacts (-111.2/contact) +
2D Compatibility (PS) -30898 + (NN) -10950 + (LL) 8420
1D Compatibility (HY) -34000 + (ID) 6850
Total energy: -318075.0 ( -145.11 by residue)
QMean score : 0.407
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