Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSLQPDAGNASWNGTEAPGGGARATPYSLQVTLTL------VCLAGLLMLLTVFGNVLVIIAVFTSRALKAPQNLFLVSLASADILVATLVIPFSLANEVMGYWYFGKAWCEIYLALDVLFCTSSIVHLCAISLDRYWSITQAIEYNLKRTPRRIKAIIITVWVISAVISFPPLISIEKKGGGGGPQPAEPRCEIN-DQKWYVISSCIGSFFAPCLIMILVYVRIYQIAKRRTRVPPSRRGPDAVAAPPGGTERRPNGLGPERSAGPGGAEAEPLPTQLNGAPGEPAPAGPRDTDALDLEESSSSDHAERPPGPRRPE-RGPRGKGKARASQVKPGDSLPRRGPGATGIGTPAAGPGEERVGAAKASRWRGRQNREKRFTFVLAVVIGVFVVCWFPFFFTYTLTAVGCSVPRTLFKFFFWFGYCNSSLNPVIYTIFNHDFRRAFKKILCRGDRKRIV |
| 4IAR Chain:A ((9-395)) | ---------------------------YIYQDSISLPWKVLLVMLLALITLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDFWLSSDITCCTASIWHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFFWRQA-----------SECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSR------------IADLEDNWETLNDNLKVIEKAD-NAAQVKDALTKMRAAALDAQKATPP-----KLEDKS----------PDSPEMKDFRHGFDILVGQIDDALKLANEGKVK-----EAQAAAEQLKTTRNAYIQKYLAARERKATKTLGIILGAFIVCWLPFFIISLVMPI--WFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161877 for 2810 contacts (-57.6/contact) +
2D Compatibility (PS) -37092 + (NN) 5838 + (LL) -964
1D Compatibility (HY) -32400 + (ID) 6700
Total energy: -233195.0 ( -82.99 by residue)
QMean score : 0.158
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