Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDHQDPYSVQATAAIAAAITFLILFTIFGNALVILAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFSLANELLGYWYFRRTWCEVYLALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIKCIILTVWLIAAVISLPPLIYKGDQGPQPRGRPQCKLNQE-AWYILASSIGSFFAPCLIMILVYLRIYLIAKRSNRRGPRAKGGPGQGESKQ--PRPDHGGALASAKLPALASVASAREVNGHSKSTGEKEEGETPEDTGTRALPPSWAALPNSGQGQKEGVCGASPEDEAEEEEEEEEECEPQAVPVSPASACSPPLQQPQGSRVLATLRGQVLLGRGVGAIGGQWWRRRAQLTREKRFTFVLAVVIGVFVLCWFPFFFSYSLGAICPKHCKVPHGLFQFFFWIGYCNSSLNPVIYTIFNQDFRRAFRRILCRPWTQTAW |
| 4IAR Chain:A ((11-395)) | --YQDSISLPWKVLLVMLLALITLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDFWLSSDITCCTASIWHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFFWR--QA------SECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEAR--SRIADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQ------KATPPKLEDKSPDSPEMKDFRHGFDILV----GQIDDALKLANEGKVKEAQAAAEQ--------------------------LKTTRNAYI--------------QKYLAARERKATKTLGIILGAFIVCWLPFFIISLVMPI-----WFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177135 for 2813 contacts (-63.0/contact) +
2D Compatibility (PS) -38877 + (NN) -11803 + (LL) 1492
1D Compatibility (HY) -34000 + (ID) 6100
Total energy: -266423.0 ( -94.71 by residue)
QMean score : 0.232
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