Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATPRGLGALLLLLLLPTSGQEKPTEGPRNTCLGSNNMYDIFNLNDKALCFTKCRQSGSDSCNVENLQRYWLNYEAHLMKEGLTQKVNTPFLKALVQNLSTNTAEDFYFSLEPSQVPRQVMKDEDKPPDRVRLPKSLFRSLPGNRSVVRLAVTILDIGPGTLFKGPRLGLGD--GSGVLNNRLVGLSVGQMHVTKLAEPLEIVFSHQRPPPNMTLT--CVFWDVTKGTT--GDWSSEGCSTEVRPEG-TVCCCDHLTFFALLLRPTLDQSTVHILTRISQAGCGVSMIFLAFTIILYAFLRLSRERFKSEDAPKIHVALGGSLFLLNLAFLVNVGSGSKGSDAACWARGAVFHYFLLCAFTWMGLEAFHLYLLAVRVFNTYFGHYFLKLSLVGWGLPALMVIGTGSANSYGLYTIRDRENRTSLELCWFREGTTMYALYITVHGYFLITFLFGMVVLALVVWKIFTLSRATAVKERGKNRKKVLTLLGLSSLVGVTWGLAIFTPLGLSTVYIFALFNSLQGVFICCWFTILYLPSQSTTVSSSTARLDQAHSASQE |
| 4DLO Chain:A ((243-368)) | --------------------------------------------------------------------------------------------------------------------------------DRVVIPKSIFTPV-SS--LDESSVFVLG---AVLYKNLDLILPTLRNYTVINSKIIVVTIRPEPKTTDSF-LEIELAHL---ANGTLNPYCVLWDDS---ESLGTWSTQGCKTVLTDASHTKCLCDRLSTFAILAQQP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DLO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81717 for 728 contacts (-112.2/contact) +
2D Compatibility (PS) -12215 + (NN) -3460 + (LL) 30000
1D Compatibility (HY) -10800 + (ID) 2050
Total energy: -80242.0 ( -110.22 by residue)
QMean score : 0.336
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