Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSILDGLADTTFRTITTDLLYVGSNDIQYEDIKGDMASKLGYFPQKFPLTSFRGSPFQEKMTAGDNPQLVPADQVNITEFYNKSLSSFKENEENIQCGENFMDIECFMVLNPSQQLAIAVLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVGSLFLTAIDRYISIHRPLAYKRIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDETYLMFW--IGVTSVLLLFIVYAYMYIL-------WKAHSHAVRMIQRGTQKSII-----------------------------------IHTSEDGKV----------QVTRPDQARMDIRLAKTLVLILVVLII-------CWGPLLAIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPSCEGTAQPLDNSMGDSDCLHKHANNAASVHRAAESCIKSTVKIAKVTMSVSTDTSAEAL |
| 4Z34 Chain:A ((38-434)) | -----------------------------------------------------------------NEPQC----------FYNESIAFFYNRSGKHLATE----------WNTVSKLVMG-LGITVCIFIMLANLLVMVAIYVNRRFHF-PIYYLMANLAAADFFAGLAYFYLMFNTGPNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIERHITVFRMQLHTRMSNR-RVVVVIVVIWTMAIVMGAIPSVGWNCICDIENCSNMAPLYSDSYLVFWAIFNLVTFVVMVVLYAHIFGYVADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKAMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLRNRDTMMSLLKTVVIVLGAFIICWTPGLVLLLLDVCCPQCDVLAYE-KFFLLLAEFNSAMNPIIYSYRDKEMSATFRQILG----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z34.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224151 for 2281 contacts (-98.3/contact) +
2D Compatibility (PS) -33336 + (NN) -14017 + (LL) 8612
1D Compatibility (HY) -35200 + (ID) 4700
Total energy: -302792.0 ( -132.75 by residue)
QMean score : 0.264
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