Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAGNGTPWDATWNITVQWLAVDIACRTLMFLKLMATYSAAFLPVVIGLDRQAAVLNP-----LGSRSGVRKLLGAAWGLSFLLAFPQLFLF-------HTVHCAGPVPFTQCVTKGSFKAQWQETTYNLFTFCCLFLLPLTAMAICYSRIVLSVSRPQTRKGSHAPAGEFALPRSFDNCPRVRLRALRLALLIL----LTFILCWTPYYLLG-MWYWFSPTMLTEVPPSLSHILFLLG----LLNAPLDPLLYGAFTLGCRRGHQELSIDSSKEGSGRMLQEEIHAFRQLEVQKTVTSRRAGETKGISITSI |
| 4XEE Chain:A ((103-346)) | ------------------WAFGDAGCRGYYFLRDACTYATALNVASLSVERYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGLVC-TPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMV-------------------------PG---RVQALRHGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALFYASSAINPILYNLVSANFRQVFLSTLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138357 for 1211 contacts (-114.3/contact) +
2D Compatibility (PS) -20289 + (NN) -6785 + (LL) 1812
1D Compatibility (HY) -18400 + (ID) 2900
Total energy: -184919.0 ( -152.70 by residue)
QMean score : 0.232
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