Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTALSSENCSFQYQLRQTNQPLDVNYLLFLIILGKILLNILTLGMRRKNTCQNFMEYFCISLAFVDLLLLVNISIILYFRDFVLLSIRFTKYHICLFTQIISFTYGFLHYPVFLTACIDYCLNFSKTTKLSFKCQKLFYFFTVILIWISVLAYVLGDPAIYQSLKAQNAYSRHCPFYVSIQSYWLSFF--MVMILFVAFITCWEEVTTLVQAIRITSYMNETILYFPFSSHSSYTVRSKKIFLSKLIVCFLSTWLPFVLLQVIIVLLKVQIPAYIEMNIPWLYFVNSFLIATVYWFNCHKLNLKDIGLPLDPFVNWKCCFIPLTIPNLEQIEKPISIMIC |
2VT4 Chain:A ((178-283)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIASSIISFYIPLLIMIFVA-LRVYREAKEQIR------------------EHKA--LKTLGIIMGVFTLC----WLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLA------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68549 for 485 contacts (-141.3/contact) +
2D Compatibility (PS) -8874 + (NN) 650 + (LL) 20620
1D Compatibility (HY) -13200 + (ID) 1150
Total energy: -70503.0 ( -145.37 by residue)
QMean score : 0.273
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