Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANASEPGGSGGGEAAALGLKLATLSLLLCV--SLAGNVLFALLIVRERSLHRAPYYLLLDLCLADGLRALACLPAVMLAARRAAAAAGAPPGALGCKLLAFLAALFCFHAAFLLLGVGVTRYLAIAHHRFYAERLAGWPCAAMLVCAAWALALAAAFPPVLDGGGDDEDAP----CALEQRPDGAPGALGFLLLLAVVVGATHLVYLRLLFF--IHDRRKMRPARLVPAVSHDW-TFHGPGATGQAAANWT------------AGFGRGPTPPALVGIRPAGP--------------------------------------GRGARRLLVLEEFKTEKRLCKMFYAVTLLFLLLWGPYVVASYLRVLVRP--GAVPQAYLTASVWLTFAQAGINPVVCFLFNRELRDCFRAQFPCCQSPRTTQATHPCDLKGIGL |
| 4IB4 Chain:A ((23-416)) | -------------EEQGNKLHWAALLILMVIIPTIGGNTLVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAMW---PLPLVLCPAWLFLDVLFSTASIWHLCAISVDRYIAI-KKPIQANQYNSRATAFIKITVVWLISIGIAIPVPIKGIET---NPNNITCVLTKERFG-----DFMLFGSLAAFFTPLAIMIVTYFLTIHALQK-KAADL----EDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQK--------------KDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCDSCNQTTLQMLLEIFVWIGYVSSGVNPLVYTLFNKTFRDAF-GRYITCNYR---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250684 for 2192 contacts (-114.4/contact) +
2D Compatibility (PS) -32985 + (NN) -18524 + (LL) 1172
1D Compatibility (HY) -27600 + (ID) 4450
Total energy: -333071.0 ( -151.95 by residue)
QMean score : 0.245
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