Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNESRWTEWRILNMSSGIVNVSERHSCPLGFGHYSVVDVCIFETVVIVLLTFLIIAGNLTVIFVFHCAPLLHHYTTSYFIQTMAYADLFVGVSCLVPTLSLLHYSTGVHESLTCQVFGYIISVLKSVSMACLACISVDRYLAITKPLSYNQLVTPCRLRICIILIWIYSCLI-FLPSFFGWGKPGYHGDIF----EWCATSWLTSAYFTGFIVCLLYAPAAFVVCFTYFHIFKICRQHTKEINDRRARFPSHEVDSSRETGHSPDR-----RYAMVLFRITSVFYMLWLPYIIYFLLESSRVLDN---PTLSFLTTWLAISNSFCNCVIYSLSNSVFRLGLRRLSETMCTSCMCVKDQEAQEPKPRKRANSCSI |
| 3SN6 Chain:R ((187-488)) | --------------------------------------------IVMSLIVLAIVFGNVLVITAIAKFERLQT-VTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYR---QEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMV-FVYSRVFQEAKRQLQKIDKSEGR------------------CLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHV--IQDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPD-FRIAFQELLC---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -289225 for 1925 contacts (-150.2/contact) +
2D Compatibility (PS) -26014 + (NN) 833 + (LL) 4884
1D Compatibility (HY) -24400 + (ID) 3850
Total energy: -337772.0 ( -175.47 by residue)
QMean score : 0.274
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