Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNGSCCRIEGDTISQVMPPLLIVAFVLGALGNGVALCGFCFHMKTWKPSTVYLFNLAVADFLLMICLPFRTDYYLRRRHWAFGDIPCRVGLFTLAMNRAGSIVFLTVVAADRYFKVVHPHHAVNTISTRVAAGIVCTLWALVILGTVYLLLENHLCVQET-AVSCESFIMESANGWHDIMFQLE----FFMPLGIILFCSFKIVWSL--------------------------------------------RRRQQLARQARMKKATRFIMVVAIVFITCYLP-------SVSARLYFLWTVPSSACDPSVHGALHITLSFTYMNSMLDPLVYYFSSPSFPKFYNKLKICSLKPKQPGHSKTQRPEEMPISNLGRRSCISVANSFQSQSDGQWDPHIVEWH |
4XNV Chain:A ((53-382)) | -----------------LPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYP-KSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDF-QTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRR---R------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215060 for 1986 contacts (-108.3/contact) +
2D Compatibility (PS) -26794 + (NN) -778 + (LL) 3732
1D Compatibility (HY) -30000 + (ID) 4200
Total energy: -273100.0 ( -137.51 by residue)
QMean score : 0.170
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