Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLANSSSTNSSVLPCPDYRPTHRLHLV--VYSLVLAAGLPLNALALWVFLRALRVHSVVSVYMCNLAASDLLFTLSLPVRLSYY-ALHHWPFPDLLCQTTGAIFQMNMYGSCIFLMLINVDRYAAIVHPLRLRHLRRPRVARLLCLG--VWALILVFAVPAARVHRPSRCRYRDLEVRLCFESFSDELWKGRLL------------PLVLLAEALGFLLPLAAVVYSSGRVFWTL---------ARPD-------------------------ATQSQRRRKTVRLLLANLVIFLLCFVPYNSTLAVYGLLRSKL---VAASVPARDRVRGVLMVMVLLAGANCVLDPLVYYFSAEGFRNTLRGLGTPHRARTSATNGTRAALAQSERSAVTTDATRPDAASQGLLRPSDSHSLSSFTQCPQDSAL |
| 4XNV Chain:A ((38-382)) | -----------SFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYP---KSLGRLKKKNAICISVLVW-LIVVVAISPILFYSGTGVRKN--KTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLI--VRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMN--LRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232836 for 2071 contacts (-112.4/contact) +
2D Compatibility (PS) -29638 + (NN) -13557 + (LL) 3944
1D Compatibility (HY) -32800 + (ID) 4400
Total energy: -309287.0 ( -149.34 by residue)
QMean score : 0.185
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