Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPTISTLDTELTPINGTEETLCYKQTLSLTV-LTCIVSLVGLTGNAVVLWLLGCRMR-RNAFSIYILNLAAADFLFLSG-----RLIYSLLSFISIPHTISKILYPVMMFSYFAGLSFLSAVSTERCLSVLWPIWYRCHRPTHLSAVVCVLLWALSLLRSILEWMLCGFLFSGADSAWCQTSDFITVAWLIFLCVVLCGSSLVL-----------LIRILCGSRKIPLTRLYVTILLTVLVFLLCGLPFGIQFF-----LFLWI--HVDREVLFCHVHLVSIFLSALNSSANPIIYFFVGS-FRQRQNRQNLKLVLQRALQDASEVDEGGGQLPEEILELSGSRLEQ |
| 4XT1 Chain:A ((25-309)) | --------DEDATPCVFTD---VLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD-----SVPCTLLTACFYVAM---FASLCFITEIALDR----YYAIVYMRYRPVKQACLFSIFWWIFAVIIAIPHFMVV----TKKDNQCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222576 for 1729 contacts (-128.7/contact) +
2D Compatibility (PS) -26205 + (NN) -9324 + (LL) 4516
1D Compatibility (HY) -32000 + (ID) 3700
Total energy: -289289.0 ( -167.32 by residue)
QMean score : 0.200
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