Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPTVPVFGTKLTPINGREETPCYNQTLSFTVLTCIISLVGLTGNAVVLWLL-GYRMRRNAVSIYILNLAAADFLFLS---FQIIRLPLRLINISHLIRKILVSVMTFPYFTGLSMLSAISTERCLSVLWPIWYRCRRPTHLSAVVCVLLW------GLSLLF-SMLEWR----FCDFLFSGADSSWCETSDFIPVAWLIF------LCVVLCVSSLVLL---VRILCGSRKMP--LTRLYVTILLTVLVFLLCGLP---FGILGALIYRMHLNLEVLYCHVYLVCMSLSSLNSSANPIIYFFVGSFRQRQNRQNLKLVLQRALQDKPEVDKGEGQLPEESLELSGSRLGP |
| 5C1M Chain:A ((8-294)) | -----------------QTGSPSMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYW---ENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWH---FCIALGYTNSCLNPVLYAFLDENFKRCF--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203236 for 1783 contacts (-114.0/contact) +
2D Compatibility (PS) -25816 + (NN) -5913 + (LL) 3432
1D Compatibility (HY) -26800 + (ID) 3850
Total energy: -262183.0 ( -147.05 by residue)
QMean score : 0.199
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