Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPLCLNCSVLPGDLYPGGARNPMACNGSAARGHFDPEDLNLTDEALRLKYLGPQQTELFMPICATYLLIFVVGAVGNGLTCLVILRHKAMRT-PTNYYLFSLAVSDLLVLLVGLPLELYE-MWHNYPFLLGVGGCYFRTLLFEMVCLASVLNVTALSVERYVAVVHPLQARSMVTRAHVRRVLGAVWGLAMLCSLPNTSLHGIRQLHVPCRGPVPDSAVCMLVRPRALYNMVVQTTALLFFCLPMAIMSVLYLLIGLRLRRERLLLMQEAKGRGSAAARSRYTCRLQQHDRGRRQVTKMLFVLVVVFGICWAPFHADRVMWSVVS--QWTDGLHLAFQHVHVISGIFFYLGSAANPVLYSLMSSRFRETFQEAL-CLGACCHRLRPRHSSHSLSRMTTGSTLCDVGSLGSWVHPLAGNDGPEAQQETDPS |
| 4BV0 Chain:A ((22-326)) | --------------------------------------------------------------VTAIYLALFVVGTVGNGVTLFTLARK-----SRVDYYLGSLALSDLLILLFALPVDVYNFIWVHHPWAFGDAGCKGYYFLREACTYATALNVVSLSVELYLAIRHP-----LMSRSRTKKFISAIWLASALLAIPMLFTVGLQNL--SGDGTHPGGLVCTPIVDTATLKVVIQLNTFMSFLFPMLVASILNTVIARRLT----VMVH-----------P---GRVQALRRG----VLVLRAMVIAFVVCWLPYHVRRLMFVYISDEQWTTALFDFYHYFYMLSNALVYVSAAINPILYNLVSANFRQVFLSTLACL----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -291703 for 2097 contacts (-139.1/contact) +
2D Compatibility (PS) -28108 + (NN) -8831 + (LL) 6796
1D Compatibility (HY) -30800 + (ID) 5100
Total energy: -357746.0 ( -170.60 by residue)
QMean score : 0.289
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