Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPANFTEGSFDSSGTGQTLDSSPVACTETVTFT-EVVEGKEWGSFYYSFKTEQLITLWVL-FVFTIVGNSVVLFS-TWRRKKKSRMTFFVTQLAITDSFTGLVNILTDINWRFTG-DFTAPDLVCRVVRYLQVVLLYASTYVLVSLSIDRYHAIVYPMKFLQ--GEKQARVLIVIAWSLSFLFSIPTLIIFGKRTLSNGEVQCWALWPDD---SYWTPYMTIVAFLVYFIPLTIISIMYGIVIRTIWIKSKTYETVIS----NCSDGKLCSSYNRGLISKA--------------------KIKAIKYSIIIILAFICCWSPYFLFDILDNFNLLPDTQ--------ERFYASV-IIQNLPALNSAINPLIYCVFSSSISFPCREQRSQDSRMTFRERTERHEMQILSKPEFI |
| 4XNV Chain:A ((38-382)) | --------------------------------SFKCALTKTGFQFYY------LPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALAD-FLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYP-KSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFI-YSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTM-NLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILY--FLAGDTF-----RRR------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207693 for 2137 contacts (-97.2/contact) +
2D Compatibility (PS) -30205 + (NN) -3395 + (LL) 4016
1D Compatibility (HY) -29200 + (ID) 4300
Total energy: -270777.0 ( -126.71 by residue)
QMean score : 0.249
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