Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKINQTFVREFILLGLSGYPKLEIIFFALILVMYVVIL---IGNGVLIIASILDSRLHMPMYFFLGNLSFLDICYTTSSIPSTLVSLISKKRNISFSGCAVQMFFGFAMGSTECFLLGMMAFDRYVAICNPLRYPIIMNKVVYVLLTSVSWLSGGINSTVQTSLAMRW-PFCGNNIINHFLCEILAVLKLACSDISVNIVTLAVSNIAFLVLPLLVIFFSYMFILYTILRT--NSATGRHKAFSTCSAHLTVVIIFYGTIFFMYAKPKSQDLLGKDNLQATEGLVSMFY-GVVTPMLNPIIYSLRNKDVKAAIKYLLSRKAINQ |
| 4LDE Chain:A ((173-461)) | -----------------DAYAADEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFL--PIQMHWYRATHQEAINCYAEE-------TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKFALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQ-----DNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225756 for 2021 contacts (-111.7/contact) +
2D Compatibility (PS) -27606 + (NN) 1407 + (LL) 3844
1D Compatibility (HY) -22000 + (ID) 3350
Total energy: -273461.0 ( -135.31 by residue)
QMean score : 0.309
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