Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWQKNQTSLADFILEGLFDDSLTHLFLFSLTMVVFLIAVSGNTLTILLICIDPQLHT-PMYFLLSQLSLMDLMHVSTIILKMATNYL-SGKKSISFVGCATQHFLYLCLGGAECFLLAVMSYDRYVAICHPLRY-AVLMNKKVGLMMAVMSWLGASVNSLIHMAILMHFPFCGPRKVYHFYCEFPAVVKLVCGDITVYETTVYISSILLLLPIFLISTSYVFILQSVIQMR-------SSGSKRNAFATCGSHLTVVSLWFGACIFSYMRPRSQCTLLQNKVGSVFYSIITPTLNSLIYTLRNKDVAKALRRVLRRDVITQCIQRLQLWLPRV |
| 4U14 Chain:A ((13-285)) | ------------------------VFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLS-LACADLI-IGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIG-LAWVISFV--LWAPAILFWQYFVGKRTVPPGEC----FIQFLSEPTITFGTAI----AAFYMPVTIMTILYWRIYKETEKMNCFEMLRIDEGLRLKIYKDCEGYYTIG---IGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLF---NQDVDAAVRGILRNAKLKPVYDSLDAVRRCA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214327 for 1736 contacts (-123.5/contact) +
2D Compatibility (PS) -26865 + (NN) -4611 + (LL) 3060
1D Compatibility (HY) -21200 + (ID) 3450
Total energy: -267393.0 ( -154.03 by residue)
QMean score : 0.166
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