Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALPITNGTLFMPFVLTFIGIPGFESVQCWIGIPFCATYVIALIGNSLLLIII---KSEPSLHEPMYIFLATLGATDISLSTSIVP-KMLDIFWFHLPEIYFDACLFQMWLIHTFQGIESGVLLA-MALDRCVAICYPLRRAIVFTRQLVTYIVVGVTLRPAILVIPCLLLIKCHLKLYRTKLIYHTYCERVALVKLATEDVYINKVYGILGAFIVGGLDFIFITLSYIQIFITVFHLPLKEARLKVFNTCIPHIYVFFQFYLLAFFFIFYSQIWILYPIICTYHLVQSLPTGPTIPQPLYLWVKDQTH |
| 4XEE Chain:A ((39-173)) | ----------------------------------YLALFVVGTVGNSVTLFTLARK-------STVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVERYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVPGRVQALRHGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALFYASSAINPILYNLVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73233 for 778 contacts (-94.1/contact) +
2D Compatibility (PS) -12460 + (NN) -2195 + (LL) 2448
1D Compatibility (HY) -12000 + (ID) 1400
Total energy: -98840.0 ( -127.04 by residue)
QMean score : 0.050
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