Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHTNVTIFHPAVFVLPGIPGLEAYHIWLSIPLCLIYITAVLGNSILIVVIVMERNLHVPMYFFLSMLAVMDILLSTTTVPKALA----------IFWLQAHNIAFDACVTQGFFVHMMFVGESAILLAMAFDRFVAICAPLRYTTVLTWPVVGRIALAV-ITRSFCIIFPVIFLLKRLPFCLTNIVPHSYCEHIGV-ARLACADITVNIWYGFSVPIVMVILDVILIAVSYSLILRAVFR-LPSQD----ARHKALSTCGSHLCVILMFYVPSFFTLLTHHFGRN-IPQHVHILLANLYVAVPPMLNPIVYGVKTKQIREGVAHRFFDIKTWCCTSPLGS |
| 4GBR Chain:A ((2-270)) | ----------------------EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASI----------ETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYR----------ATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILL-NWIGYVNSGFNPLIYCRSPDFRIAFQELLCL------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -278230 for 1823 contacts (-152.6/contact) +
2D Compatibility (PS) -25435 + (NN) -6354 + (LL) 3992
1D Compatibility (HY) -22000 + (ID) 3600
Total energy: -331627.0 ( -181.91 by residue)
QMean score : 0.330
|
|
|