Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGDNSSSLTPGFFILNGVPGLEATHIWI---SLPFCFMYIIAVVGNCGLICLISHEEALHRPMYYFLALLSFTDVTLCTTMVP--------------NMLCIFWFNLKEIDFNACLAQMFFVHMLTGMESGVLMLMALDRYVAICYPLRYATILTNPVIAKAGLATFLRNVMLIIPFTLLTKRLPYCRGNFIPHTYCDHMS-VAKVSCGNFKVNAIYGLMVALLIGVFDICCISVSYTMILQ-AVMSLSSAD----ARHKAFSTCTSHMCSIVITYVAAFFTFFTHRFVGHNIPNHIHIIVANLYLLLPPTMNPIVYGVKTKQIQEGVIKFLLGDKVSFTYDK |
| 4LDE Chain:A ((177-447)) | -----------------------ADEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIE--------------TLCVIAVDRYFAITSPFKYQSLLTKN---KARVI-----ILMVWIVSGLTSFLP-IQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ---KFALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILL-NWIGYVNSGFNPLIYCRSPDFRIAFQELLCL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251499 for 1764 contacts (-142.6/contact) +
2D Compatibility (PS) -24707 + (NN) -3779 + (LL) 3212
1D Compatibility (HY) -28000 + (ID) 3000
Total energy: -307773.0 ( -174.47 by residue)
QMean score : 0.136
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