Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIIYKQGITFLQKENNNTIHLNTMFFLSPAETHQRMAAENHSFVTKFILVGLTEKSELQLPLFLVFLGIYVVTVLGNLGMITLIGLSSHLHTPMYCFLSSLSFIDFCHSTVIT-PKMLVNFVTEKNIISYPECMTQLYFFLVFAIAECHMLAAMAYDGYVAICSPLLYSIIISNKACFSLILVVYVIGLICASAHIGCMFRVQF---------CKFDVINHYFCDLISILKLSCSSTYINELLILIFSGINILVPSLTILSSYIFIIASILRIRYTEGR-SKAFSTCSSHISAVSVFFGSAAFMYLQPSSVSSM--DQGKVSSVF-YTIVVPML--------NPLIYSLRNKDVHVALKKTLGKRTFL |
2ZIY Chain:A ((61-329)) | --------------------------------------------------------------------------------------TKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWA---IGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILG-FFGPILIIFFCYFNIV---MSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTC |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180539 for 1737 contacts (-103.9/contact) +
2D Compatibility (PS) -24616 + (NN) 1326 + (LL) 7884
1D Compatibility (HY) -20400 + (ID) 3050
Total energy: -219395.0 ( -126.31 by residue)
QMean score : 0.131
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