Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATALPPRLQPVRGNETLREHYQYVGKLAGRLKEASEGSTLTTVLFLVICSFIVLENLMVLIAIWKNNKFHNRMYFFIGNLALCDLLAGIAYKVNILMSGKKTFSLSPTVWFLREGSMFVALGASTCSLLAIAIERHLTMIKMRPYDANKRHRVFLLIGMCWLIAFTLGALPILGWNCLHNLPDCSTILPLYSKKYIAFCISIFTAILVTIVILYARIYFLVKSSSRKVANHNNSERSMALLRTVVIVVSVFIACWSPLFILFLIDVACRVQACPILFKAQWFIVLAVLNSAMNPVIYTLASKEMRRAFFRLVCNCLVRG--RGARASPIQPALDPSRSKSSSSNNSSHSPKVKEDLPHTAPSSCIMDKNAALQNGIFCN
3V2W Chain:A ((41-343))---------------DIIVRHYNYTGKL--NISA------LTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITMLK-------NNFRLFLLISACWVISLILGGLPIMGWNCISALSSCSTVLPLYHKHYILFCTTVFTLLLLSIVILYCRIYSLV--------------RTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAK-----SELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSR


General information:
TITO was launched using:
RESULT:

Template: 3V2W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -245292 for 1904 contacts (-128.8/contact) +
2D Compatibility (PS) -29772 + (NN) -13068 + (LL) 2252
1D Compatibility (HY) -36400 + (ID) 6800
Total energy: -329080.0 ( -172.84 by residue)
QMean score : 0.360

(partial model without unconserved sides chains):
PDB file : Tito_3V2W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V2W-query.scw
PDB file : Tito_Scwrl_3V2W.pdb: